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M. G. Winkler and Sanford, P. R., Coastal Massachusetts Pond Development - Edaphic, Climatic, and Sea-Level Impacts since Deglaciation, Journal of Paleolimnology, vol. 14, no. 3, pp. 311-336, 1995.
M. G. Winkler, Sanford, P. R., and Kaplan, S. W., Hydrology, vegetation, and climate change in the southern Everglades during the Holocene, Bulletin of American Paleontology, vol. 361, pp. 57-99, 2001.
M. G. Winkler, The development of the Gull Pond Chain of Lakes and the Herring River Basin in the Cape Cod National Seashore. Report, 1994.
M. G. Winkler, The modern limnology of the interdunal Provincelands Ponds in the Cape Cod National Seashore. Technical Report. Final Report, National Park Service, North Atlantic Region, 1994.
M. G. Winkler, The paleoecology and pH history of Ike Walton Lake and comparison with the recent history of Zee Lake. Report, Lac du Flambeau Water Resources Program Contract #1243, 1996.
M. G. Winkler, Sanford, P. R., and Kaplan, S., Paleoecology of the Everglades National Park. Report, National Park Service, Everglades National Park, Homestead, Florida, 1996.
M. G. Winkler and Sanford, P. R., Paleoecological research at Isle Royale, Apostle Islands, and Voyageurs National Parks. Report, 1997.
M. G. Winkler and Sanford, P. R., Western Great Lakes Paleoecology Study. Report, National Biological Service Global Climate Change Initiative, 1997.
M. G. Winkler and Sanford, P. R., Environmental changes since deglaciation in Voyageurs National Park: A summary for park personnel in Holocene Paleoenvironnments in Western Great Lakes Park. Report, National Park Service, 1998.
M. G. Winkler and Sanford, P. R., Western Great Lakes paleoecology study, global climate change initiative. In Holocene Paleoenvironments in Western Great Lakes Parks. Report, National Park Service & USGS Biological Resources Div., Northern Prairie Wildlife Research Center, Columbia, Missouri, 1998.
M. G. Winkler and Sanford, P. R., Environmental changes in the last centure in Little Trout Lake and Inkspot Bay, Lac du Flambeau Tribal Lands, Wisconsin. Preliminary Results Report, Water Resources Division, Lac du Flambeau Tribe, 1999.
M. G. Winkler and Sanford, P. R., Environmental changes in the last centure in Little Trout Lake, Inkspot Bay, Great Corn and Little Corn Lakes, Lac du Flambeau Tribal Lands, Wisconsin. Report, 2000.
M. G. Winkler and Kaplan, S., Diatom and sediment evidence for late Holocene hydrologic changes, Everglades National Park, in ASLO Meeting, Milwaukee, WI, 1996.
M. G. Winkler, Sanford, P. R., and Kaplan, S. W., Paleoecology of the Everglades National Park Paper, in Florida Bay Science Conference, Florida, 1996, pp. 121-124.
M. G. Winkler and Portnoy, J., Ryder Pond: A drought-induced natural acidification experiment, in Ecological Society of America (ESA) meeting, Providence, RI, 1996.
M. G. Winkler, Sanford, P. R., Cole, K. L., and Flakne, R. L., Western Great Lakes regional paleoenvironmental changes: island and inland contrasts, Ecological Society of America Bulletin, 1997.
M. G. Winkler and Sanford, P. R., Paleolimnology research at Isle Royale, Apostle Island, and Voyageurs National Parks, USGS Biological Resources Division, Global Change Research Program, vol. Summary Report, 1997.
M. G. Winkler, Paleocology research in Great Lakes (U.S.A.)National Parks, Abstracts for American Society of Limnology and Oceanography, 1997.
M. G. Winkler, Sensing plant community and climate change by charcoal-carbon isotope analysis, Ecoscience, vol. 1, no. 4, pp. 340-345, 1994.