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J. P. Donnelly and Giosan, L., Research focus - Tempestuous highs and lows in the Gulf of Mexico, Geology, vol. 36, no. 9, pp. 751-752, 2008.
J. P. Donnelly, Butler, J., Roll, S., Wengren, M., and Webb, T., A backbarrier overwash record of intense storms from Brigantine, New Jersey, Marine Geology, vol. 210, no. 1-4, pp. 107-121, 2004.
J. P. Donnelly and Bertness, M. D., Rapid shoreward encroachment of salt marsh cordgrass in response to accelerated sea-level rise, Proc Natl Acad Sci U S A, vol. 98, no. 25, pp. 14218-23, 2001.
J. P. Donnelly and Woodruff, J. D., Intense hurricane activity over the past 5,000 years controlled by El Nino and the West African monsoon, Nature, vol. 447, no. 7143, pp. 465-8, 2007.
J. P. Donnelly, Roll, S., Wengren, M., Butler, J., Lederer, R., and Webb, T., Sedimentary evidence of intense hurricane strikes from New Jersey, Geology, vol. 29, no. 7, pp. 615-618, 2001.
J. P. Donnelly, Driscoll, N., Uchupi, E., Keigwin, L., Schwab, W., Thieler, E. R., and Swift, S., Catastrophic meltwater discharge down the Hudson River Valley: A potential trigger for the Intra-Allerod cold period, Geology, vol. 33, pp. 89-92, 2005.
J. P. Donnelly, Evidence of past intense tropical cyclones from backbarrier salt pond sediments: A case study from Isla de Culebrita, Puerto Rico, USA, Journal of Coastal Research, vol. SI42, pp. 201-210, 2005.
J. P. Donnelly, Cleary, P., Newby, P., and Ettinger, R., Coupling instrumental and geological records of sea-level change: Evidence from southern New England of an increase in the rate of sea-level rise in the late 19th century, Geophysical Research Letters, vol. 31, no. 5, 2004.