Winkler M.G, Sanford P.R, Kaplan S.W.  2001.  Hydrology, vegetation, and climate change in the southern Everglades during the Holocene. Bulletin of American Paleontology. 361:57-99.

Winkler M.G, Sanford P.R.  2000.  Environmental changes in the last centure in Little Trout Lake, Inkspot Bay, Great Corn and Little Corn Lakes, Lac du Flambeau Tribal Lands, Wisconsin. Report. Final Report to Water Resources Division, Lac du Flambeau Tribe:44.

Davis M., Douglas C., Calcote R., Cole K.L, Winkler M.G, Flakne R..  2000.  Holocene climate in the western Great Lakes national parks and lakeshores: Implications for future climate change. Conservation Biology. 14(4):968-983.

Winkler M.G, Sanford P.R.  1999.  Environmental changes in the last centure in Little Trout Lake and Inkspot Bay, Lac du Flambeau Tribal Lands, Wisconsin. Preliminary Results Report. :12.

Winkler M.G, Sanford P.R.  1998.  Environmental changes since deglaciation in Voyageurs National Park: A summary for park personnel in Holocene Paleoenvironnments in Western Great Lakes Park. Report. 9; Final report:3.

Winkler M.G, Sanford P.R.  1998.  Western Great Lakes paleoecology study, global climate change initiative. In Holocene Paleoenvironments in Western Great Lakes Parks. Report. Final report

Winkler M.G.  1997.  Late Quaternary climate, fire, and vegetation dynamics (Book Section). Sediment Records of Biomass Burning and Global Change. :329-346.

Winkler M.G.  1997.  Paleocology research in Great Lakes (U.S.A.)National Parks. Abstracts for American Society of Limnology and Oceanography. 

Winkler M.G, Sanford P.R.  1997.  Paleoecological research at Isle Royale, Apostle Islands, and Voyageurs National Parks. Report. :85.

Winkler M.G, Sanford P.R.  1997.  Paleolimnology research at Isle Royale, Apostle Island, and Voyageurs National Parks. USGS Biological Resources Division, Global Change Research Program. Summary Report

Cole K., Winkler M.G, Sanford P.R.  1997.  Preliminary paleoecology study of Salt Pond and Nauset Lagoon, Cape Cod National Seashore (Report). Final Report:40.

Winkler M.G, Sanford P.R.  1997.  Western Great Lakes Paleoecology Study. Report. Interim Report:71.

Winkler M.G, Sanford P.R, Cole K.L, Flakne R.L.  1997.  Western Great Lakes regional paleoenvironmental changes: island and inland contrasts. Ecological Society of America Bulletin. 

Winkler M.G, Kaplan S..  1996.  Diatom and sediment evidence for late Holocene hydrologic changes, Everglades National Park. ASLO Meeting. 

Cole K.L, Davis M.B, Winkler M.G.  1996.  One thousand years of change in the Great Lakes Region. A pilot project of the NBS Landscape Use History of North America (LUHNA) publ. electronically on the World Wide Web. 

Winkler M.G.  1996.  The paleoecology and pH history of Ike Walton Lake and comparison with the recent history of Zee Lake. Report. Final Report:55.

Winkler M.G, Sanford P.R, Kaplan S.W.  1996.  Paleoecology of the Everglades National Park Paper. Florida Bay Science Conference. :121-124.

Winkler M.G, Sanford P.R, Kaplan S..  1996.  Paleoecology of the Everglades National Park. Report. Technical Report 97-006:212.

Winkler M.G, Portnoy J..  1996.  Ryder Pond: A drought-induced natural acidification experiment. Ecological Society of America (ESA) meeting. 

Winkler M.G, Sanford P.R.  1995.  Coastal Massachusetts Pond Development - Edaphic, Climatic, and Sea-Level Impacts since Deglaciation. Journal of Paleolimnology. 14(3):311-336.

Winkler M.G.  1994.  The development of the Gull Pond Chain of Lakes and the Herring River Basin in the Cape Cod National Seashore. Report. 

Winkler M.G.  1994.  The modern limnology of the interdunal Provincelands Ponds in the Cape Cod National Seashore. Technical Report. Final Report. NPS/NAROSS/NRTR-94/20:121.

Winkler M.G.  1994.  Sensing plant community and climate change by charcoal-carbon isotope analysis. Ecoscience. 1(4):340-345.